* using log directory 'd:/Rcompile/CRANpkg/local/4.5/read.gt3x.Rcheck' * using R Under development (unstable) (2024-06-03 r86679 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'read.gt3x/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'read.gt3x' version '1.2.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'read.gt3x' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 13.2.0' * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [3s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [46s] ERROR Running 'testthat.R' [46s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(read.gt3x) > > test_check("read.gt3x") trying URL 'https://github.com/THLfi/read.gt3x/releases/download/v1.0/EE_left_29.5.2017-05-30.gt3x.zip' trying URL 'https://ndownloader.figshare.com/files/21855801' trying URL 'https://ndownloader.figshare.com/files/25557302' trying URL 'https://github.com/THLfi/read.gt3x/files/3522749/GT3X%2B.01.day.gt3x.zip' $name_gt3x [1] "PU3_CLE2B21130054_2017-03-16.gt3x.gz" $download_url_gt3x [1] "https://ndownloader.figshare.com/files/21855807" $id [1] "PU3" $serial [1] "CLE2B21130054" $name_csv [1] "PU3_CLE2B21130054_2017-03-16.csv.gz" $download_url_csv [1] "https://ndownloader.figshare.com/files/24488492" GT3X information $ Serial Number :"TAS1H30182785" $ Device Type :"Link" $ Firmware :"1.7.2" $ Battery Voltage :"4.18" $ Sample Rate :100 $ Start Date : POSIXct, format: "2019-09-17 18:40:00" $ Stop Date : POSIXct, format: "2019-09-18 19:00:00" $ Last Sample Time : POSIXct, format: "2019-09-17 19:20:05" $ TimeZone :"-04:00:00" $ Download Date : POSIXct, format: "2019-09-17 19:20:05" $ Board Revision :"8" $ Unexpected Resets :"0" $ Acceleration Scale:256 $ Acceleration Min :"-8.0" $ Acceleration Max :"8.0" $ Subject Name :"suffix_85" $ Serial Prefix :"TAS" Reading Stream... ---GT3X PARAMETERS address: 0 key: 6 value: 1 address: 0 key: 7 value: 54703161 address: 0 key: 8 value: 8 address: 0 key: 9 value: 1534154836 address: 0 key: 13 value: 17235970 address: 0 key: 16 value: 3791650816 address: 0 key: 20 value: 0 address: 0 key: 21 value: 0 address: 0 key: 22 value: 0 address: 0 key: 23 value: 0 address: 0 key: 26 value: 2 address: 0 key: 28 value: 262013 address: 0 key: 29 value: 255 address: 0 key: 32 value: 16908288 address: 0 key: 37 value: 1024 address: 0 key: 38 value: 0 address: 0 key: 49 value: 2048 address: 0 key: 50 value: 88181047 address: 0 key: 51 value: 6.82667 address: 0 key: 55 value: 256 address: 0 key: 57 value: 333.87 address: 0 key: 58 value: 21 address: 0 key: 61 value: 2 address: 1 key: 0 value: 0 address: 1 key: 1 value: 872668711 address: 1 key: 2 (features) value: 388 address: 1 key: 3 value: 1 address: 1 key: 4 value: 4294967131 address: 1 key: 5 value: 4294967095 address: 1 key: 6 value: 4294967149 address: 1 key: 7 value: 298 address: 1 key: 8 value: 286 address: 1 key: 9 value: 300 address: 1 key: 10 value: 100 address: 1 key: 12 (start time) value: 1568745600 address: 1 key: 13 value: 1568833200 address: 1 key: 14 value: 1568745556 address: 1 key: 15 value: 74 address: 1 key: 16 value: 40 address: 1 key: 17 value: 72 address: 1 key: 20 value: 0 address: 1 key: 21 value: 0 address: 1 key: 33 value: 60000 address: 1 key: 34 value: 4294965247 address: 1 key: 35 value: 4294965190 address: 1 key: 36 value: 4294965237 address: 1 key: 37 value: 2051 address: 1 key: 38 value: 2000 address: 1 key: 39 value: 2048 address: 1 key: 40 value: 0 address: 1 key: 41 value: 1 address: 1 key: 42 value: 0 address: 1 key: 43 value: 4294967283 address: 1 key: 44 value: 0 address: 1 key: 45 value: 0 address: 1 key: 46 value: 0 ---END PARAMETERS param_start_time: 1568745600 First ACTIVTY2 packet, sample size: 100 imputing 400 values at index 1000 imputing 10500 values at index 26100 imputing 55400 values at index 37700 imputing 112600 values at index 94500 imputing 3300 values at index 209700 imputing 100 values at index 214000 Activity with Sample Size of 0 payload start: 1568747741 total_records: 214100 max_samples: 240500 imputing 100 values at index 214100 imputing 500 values at index 214200 Activity with Sample Size of 0 payload start: 1568747759 total_records: 215900 max_samples: 240500 imputing 100 values at index 215900 Total Records: 216000 Scaling... imputing 24500 values at index 216000 Creating dimnames CPP returning [ FAIL 4 | WARN 4 | SKIP 4 | PASS 32 ] ══ Skipped tests (4) ═══════════════════════════════════════════════════════════ • On CRAN (4): 'test-index_out_of_bounds.R:4:3', 'test-index_out_of_bounds.R:28:3', 'test-reordering.R:28:3', 'test-reordering.R:109:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-datapath.R:2:3'): Getting datapath ───────────────────────────── Error in `download.file(url, temp, method = "auto", quiet = !verbose, mode = "wb")`: cannot open URL 'https://github.com/THLfi/read.gt3x/releases/download/v1.0/EE_left_29.5.2017-05-30.gt3x.zip' Backtrace: ▆ 1. └─read.gt3x::gt3x_datapath() at test-datapath.R:2:3 2. └─read.gt3x::gt3x_download(...) 3. └─utils::download.file(...) ── Error ('test-old_format_filesize.R:4:1'): (code run outside of `test_that()`) ── Error in `utils::download.file(url, destfile = path, mode = "wb")`: cannot open URL 'https://ndownloader.figshare.com/files/21855801' Backtrace: ▆ 1. └─utils::download.file(url, destfile = path, mode = "wb") at test-old_format_filesize.R:4:1 ── Error ('test-read_MRA.R:4:1'): (code run outside of `test_that()`) ────────── Error in `utils::download.file(url, destfile = path, mode = "wb")`: cannot open URL 'https://ndownloader.figshare.com/files/25557302' Backtrace: ▆ 1. └─utils::download.file(url, destfile = path, mode = "wb") at test-read_MRA.R:4:1 ── Error ('test-read_old.R:5:1'): (code run outside of `test_that()`) ────────── Error in `utils::download.file(url, destfile = destfile, mode = "wb")`: cannot open URL 'https://github.com/THLfi/read.gt3x/files/3522749/GT3X%2B.01.day.gt3x.zip' Backtrace: ▆ 1. └─utils::download.file(url, destfile = destfile, mode = "wb") at test-read_old.R:5:1 [ FAIL 4 | WARN 4 | SKIP 4 | PASS 32 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [5s] OK * checking PDF version of manual ... [21s] OK * checking HTML version of manual ... [3s] OK * DONE Status: 1 ERROR