Last updated on 2024-06-10 23:56:23 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 3.1.3 | 180.84 | 163.39 | 344.23 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 3.1.3 | 126.82 | 114.22 | 241.04 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 3.1.3 | 493.97 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 3.1.3 | 475.34 | NOTE | |||
| r-devel-windows-x86_64 | 3.1.3 | 180.00 | 167.00 | 347.00 | FAIL | |
| r-patched-linux-x86_64 | 3.1.3 | 152.62 | 157.44 | 310.06 | NOTE | |
| r-release-linux-x86_64 | 3.1.3 | 158.46 | 158.33 | 316.79 | NOTE | |
| r-release-macos-arm64 | 3.1.3 | 153.00 | NOTE | |||
| r-release-macos-x86_64 | 3.1.3 | 151.00 | NOTE | |||
| r-release-windows-x86_64 | 3.1.3 | 173.00 | 209.00 | 382.00 | NOTE | |
| r-oldrel-macos-arm64 | 3.1.3 | 150.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 3.1.3 | 282.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 3.1.3 | 198.00 | 230.00 | 428.00 | NOTE |
Version: 3.1.3
Check: C++ specification
Result: NOTE
Specified C++11: please drop specification unless essential
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 3.1.3
Check: for GNU extensions in Makefiles
Result: NOTE
GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 3.1.3
Check: tests
Result: ERROR
Running 'testthat.R' [69s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(BioCro)
>
> test_check("BioCro")
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 3817 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test.ModuleReordering.R:15:32'): (code run outside of `test_that()`) ──
Error in `as.data.frame(.Call(R_run_biocro, initial_values, parameters,
drivers, direct_module_creators, differential_module_creators,
ode_solver_type, ode_solver_output_step_size, ode_solver_adaptive_rel_error_tol,
ode_solver_adaptive_abs_error_tol, ode_solver_adaptive_max_steps,
verbose))`: Caught exception in R_run_biocro: std::bad_alloc
Backtrace:
▆
1. ├─base::with(...) at test.ModuleReordering.R:15:1
2. └─base::with.default(...)
3. └─base::eval(substitute(expr), data, enclos = parent.frame())
4. └─base::eval(substitute(expr), data, enclos = parent.frame())
5. └─BioCro::run_biocro(...) at test.ModuleReordering.R:15:32
6. └─base::as.data.frame(...)
── Error ('test.PartialApplication.R:14:35'): (code run outside of `test_that()`) ──
Error in `as.data.frame(.Call(R_run_biocro, initial_values, parameters,
drivers, direct_module_creators, differential_module_creators,
ode_solver_type, ode_solver_output_step_size, ode_solver_adaptive_rel_error_tol,
ode_solver_adaptive_abs_error_tol, ode_solver_adaptive_max_steps,
verbose))`: Caught exception in R_run_biocro: std::bad_alloc
Backtrace:
▆
1. ├─base::with(...) at test.PartialApplication.R:14:1
2. └─base::with.default(...)
3. └─base::eval(substitute(expr), data, enclos = parent.frame())
4. └─base::eval(substitute(expr), data, enclos = parent.frame())
5. └─BioCro::run_biocro(...) at test.PartialApplication.R:14:35
6. └─base::as.data.frame(...)
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 3817 ]
Error: Test failures
Execution halted
Flavor: r-devel-windows-x86_64
Version: 3.1.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
Flavor: r-devel-windows-x86_64
Version: 3.1.3
Check: PDF version of manual
Result: WARN
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
Flavor: r-devel-windows-x86_64
Version: 3.1.3
Check: PDF version of manual without index
Result: ERROR
Re-running with no redirection of stdout/stderr.
Flavor: r-devel-windows-x86_64
Version: 3.1.3
Check: HTML version of manual
Result: FAIL
Flavor: r-devel-windows-x86_64
Version: 3.1.3
Check: installed package size
Result: NOTE
installed size is 19.0Mb
sub-directories of 1Mb or more:
data 2.0Mb
libs 16.7Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64