Last updated on 2026-08-02 13:49:05 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 4.0.2 | 9.10 | 368.83 | 377.93 | OK | |
| r-devel-linux-x86_64-debian-gcc | 4.0.2 | 5.35 | 261.47 | 266.82 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 4.1.0 | 13.00 | 530.38 | 543.38 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 4.1.0 | 263.87 | OK | |||
| r-devel-windows-x86_64 | 4.0.2 | 11.00 | 294.00 | 305.00 | OK | |
| r-patched-linux-x86_64 | 4.0.2 | 9.20 | 348.63 | 357.83 | OK | |
| r-release-linux-x86_64 | 4.0.2 | 8.92 | 349.65 | 358.57 | OK | |
| r-release-macos-arm64 | 4.1.0 | 2.00 | 598.00 | 600.00 | OK | |
| r-release-macos-x86_64 | 4.1.0 | 6.00 | 1797.00 | 1803.00 | FAIL | |
| r-release-windows-x86_64 | 4.0.2 | 12.00 | 323.00 | 335.00 | OK | |
| r-oldrel-macos-arm64 | 4.1.0 | 2.00 | 1801.00 | 1803.00 | ERROR | |
| r-oldrel-macos-x86_64 | 4.1.0 | 6.00 | 1797.00 | 1803.00 | FAIL | |
| r-oldrel-windows-x86_64 | 4.0.2 | 15.00 | 392.00 | 407.00 | OK |
Version: 4.0.2
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp04JGrm’ ‘~/tmp/scratch/Rtmp0MQZPk’
‘~/tmp/scratch/Rtmp0nhPBI’ ‘~/tmp/scratch/Rtmp0o1rlq’
‘~/tmp/scratch/Rtmp1iWg4s’ ‘~/tmp/scratch/Rtmp1oSYZZ’
‘~/tmp/scratch/Rtmp1qUqsM’ ‘~/tmp/scratch/Rtmp2Hk07K’
‘~/tmp/scratch/Rtmp2UZ3xg’ ‘~/tmp/scratch/Rtmp2VF2yu’
‘~/tmp/scratch/Rtmp3PfZ4t’ ‘~/tmp/scratch/Rtmp3bJn1i’
‘~/tmp/scratch/Rtmp3ggZlK’ ‘~/tmp/scratch/Rtmp3nH7tc’
‘~/tmp/scratch/Rtmp46elBR’ ‘~/tmp/scratch/Rtmp4I3Tvj’
‘~/tmp/scratch/Rtmp4M3kzP’ ‘~/tmp/scratch/Rtmp4VLvpP’
‘~/tmp/scratch/Rtmp4pHLR7’ ‘~/tmp/scratch/Rtmp4tQYRu’
‘~/tmp/scratch/Rtmp5CeYoA’ ‘~/tmp/scratch/Rtmp5cSnF7’
‘~/tmp/scratch/Rtmp5imlwy’ ‘~/tmp/scratch/Rtmp6YBfKy’
‘~/tmp/scratch/Rtmp6pJdp6’ ‘~/tmp/scratch/Rtmp75ITIy’
‘~/tmp/scratch/Rtmp775ZgN’ ‘~/tmp/scratch/Rtmp7qIQq5’
‘~/tmp/scratch/Rtmp8MtH00’ ‘~/tmp/scratch/Rtmp8xiPrR’
‘~/tmp/scratch/RtmpAnvvmA’ ‘~/tmp/scratch/RtmpAu72wY’
‘~/tmp/scratch/RtmpC4CnFr’ ‘~/tmp/scratch/RtmpCBvYHL’
‘~/tmp/scratch/RtmpD9xLoe’ ‘~/tmp/scratch/RtmpDZFSwK’
‘~/tmp/scratch/RtmpEQ3Xwd’ ‘~/tmp/scratch/RtmpF5KW9k’
‘~/tmp/scratch/RtmpFKq1uM’ ‘~/tmp/scratch/RtmpGFx3uG’
‘~/tmp/scratch/RtmpGndBz6’ ‘~/tmp/scratch/RtmpGotWGf’
‘~/tmp/scratch/RtmpH3dVkj’ ‘~/tmp/scratch/RtmpHFiAlS’
‘~/tmp/scratch/RtmpHwCVjm’ ‘~/tmp/scratch/RtmpItvIEp’
‘~/tmp/scratch/RtmpJ4dYfc’ ‘~/tmp/scratch/RtmpJtRGhF’
‘~/tmp/scratch/RtmpK564X5’ ‘~/tmp/scratch/RtmpK7HE8N’
‘~/tmp/scratch/RtmpKEoDJt’ ‘~/tmp/scratch/RtmpKq7Bfv’
‘~/tmp/scratch/RtmpKxabDz’ ‘~/tmp/scratch/RtmpL7ePjJ’
‘~/tmp/scratch/RtmpLIEgg3’ ‘~/tmp/scratch/RtmpLbNwIO’
‘~/tmp/scratch/RtmpNEQRef’ ‘~/tmp/scratch/RtmpNj9TMd’
‘~/tmp/scratch/RtmpODeimO’ ‘~/tmp/scratch/RtmpPbrtIH’
‘~/tmp/scratch/RtmpQ1APjN’ ‘~/tmp/scratch/RtmpQ5f3rh’
‘~/tmp/scratch/RtmpQKOqbu’ ‘~/tmp/scratch/RtmpQWD432’
‘~/tmp/scratch/RtmpRQgyAz’ ‘~/tmp/scratch/RtmpRZjGsA’
‘~/tmp/scratch/RtmpRexb4R’ ‘~/tmp/scratch/RtmpSQbRYV’
‘~/tmp/scratch/RtmpT8wu8z’ ‘~/tmp/scratch/RtmpTqIY8W’
‘~/tmp/scratch/RtmpU3LNX5’ ‘~/tmp/scratch/RtmpUpnskM’
‘~/tmp/scratch/RtmpUtaAju’ ‘~/tmp/scratch/RtmpUwwqLU’
‘~/tmp/scratch/RtmpVVsUlG’ ‘~/tmp/scratch/RtmpVr9RLj’
‘~/tmp/scratch/RtmpVrovrZ’ ‘~/tmp/scratch/RtmpVu21iO’
‘~/tmp/scratch/RtmpVwzJrZ’ ‘~/tmp/scratch/RtmpWHO8AC’
‘~/tmp/scratch/RtmpWjKFFF’ ‘~/tmp/scratch/RtmpWw61uw’
‘~/tmp/scratch/RtmpWweMqd’ ‘~/tmp/scratch/RtmpXKtXT6’
‘~/tmp/scratch/RtmpXlYehc’ ‘~/tmp/scratch/RtmpZO6Vjf’
‘~/tmp/scratch/RtmpZuRZEo’ ‘~/tmp/scratch/RtmpaiSsXN’
‘~/tmp/scratch/RtmpamrrjK’ ‘~/tmp/scratch/Rtmpb9lT80’
‘~/tmp/scratch/RtmpbVQhhd’ ‘~/tmp/scratch/RtmpbvxXP8’
‘~/tmp/scratch/RtmpcGwU6m’ ‘~/tmp/scratch/RtmpcwVB1Z’
‘~/tmp/scratch/Rtmpd1KFvY’ ‘~/tmp/scratch/RtmpdZn335’
‘~/tmp/scratch/Rtmpdd0323’ ‘~/tmp/scratch/RtmpdzolCj’
‘~/tmp/scratch/RtmpeEYTST’ ‘~/tmp/scratch/RtmpeF2G8j’
‘~/tmp/scratch/Rtmpf033HJ’ ‘~/tmp/scratch/Rtmpf40ZKR’
‘~/tmp/scratch/Rtmpf5fCpR’ ‘~/tmp/scratch/RtmpfDGP5l’
‘~/tmp/scratch/RtmpfZUSOt’ ‘~/tmp/scratch/RtmpfdhvxV’
‘~/tmp/scratch/RtmpfjhJPB’ ‘~/tmp/scratch/RtmpflYsd3’
‘~/tmp/scratch/Rtmpg4i9PM’ ‘~/tmp/scratch/RtmphYqrWz’
‘~/tmp/scratch/RtmphvLXXE’ ‘~/tmp/scratch/Rtmpi2dmSU’
‘~/tmp/scratch/Rtmpi4JPLc’ ‘~/tmp/scratch/RtmpicPcdY’
‘~/tmp/scratch/Rtmpiw2KmS’ ‘~/tmp/scratch/RtmpizCkef’
‘~/tmp/scratch/RtmpjchcCb’ ‘~/tmp/scratch/RtmpkF4nSA’
‘~/tmp/scratch/Rtmpkf4hM2’ ‘~/tmp/scratch/RtmplXD3z3’
‘~/tmp/scratch/RtmpliR2mP’ ‘~/tmp/scratch/Rtmplpcghu’
‘~/tmp/scratch/Rtmplu3V4p’ ‘~/tmp/scratch/Rtmpmk6JG1’
‘~/tmp/scratch/RtmpnRmjtG’ ‘~/tmp/scratch/Rtmpo23jnO’
‘~/tmp/scratch/RtmpoUliAI’ ‘~/tmp/scratch/Rtmpow1yLw’
‘~/tmp/scratch/Rtmppwj7BW’ ‘~/tmp/scratch/Rtmppx8lBo’
‘~/tmp/scratch/Rtmpq1t8RQ’ ‘~/tmp/scratch/RtmpqAFhRY’
‘~/tmp/scratch/RtmpqU4lLe’ ‘~/tmp/scratch/RtmpqkkoDP’
‘~/tmp/scratch/RtmprW7pjS’ ‘~/tmp/scratch/Rtmps900je’
‘~/tmp/scratch/RtmpsthpBN’ ‘~/tmp/scratch/Rtmpt4cXxK’
‘~/tmp/scratch/RtmptBeqL9’ ‘~/tmp/scratch/RtmptJtpJU’
‘~/tmp/scratch/RtmptUZzGt’ ‘~/tmp/scratch/RtmpuG5itX’
‘~/tmp/scratch/RtmpuTHWi1’ ‘~/tmp/scratch/RtmpuUrg4G’
‘~/tmp/scratch/Rtmpv1bBMZ’ ‘~/tmp/scratch/Rtmpv5i0y3’
‘~/tmp/scratch/RtmpvHBGyT’ ‘~/tmp/scratch/RtmpvwceA3’
‘~/tmp/scratch/RtmpwEs035’ ‘~/tmp/scratch/RtmpwJWAel’
‘~/tmp/scratch/RtmpwNmvtD’ ‘~/tmp/scratch/RtmpxNluO3’
‘~/tmp/scratch/RtmpxQ3ooB’ ‘~/tmp/scratch/RtmpxRPs8P’
‘~/tmp/scratch/RtmpxUC1yB’ ‘~/tmp/scratch/RtmpyCyerW’
‘~/tmp/scratch/RtmpySJ5ND’ ‘~/tmp/scratch/RtmpySQHzR’
‘~/tmp/scratch/RtmpyutHl8’ ‘~/tmp/scratch/RtmpzLMb2D’
‘~/tmp/scratch/RtmpzUv3Ck’ ‘~/tmp/scratch/Rtmpzccb1d’
‘~/tmp/scratch/RtmpzyNBEs’ ‘~/tmp/scratch/xvfb-run.0EZDdM’
‘~/tmp/scratch/xvfb-run.0x0Qd1’ ‘~/tmp/scratch/xvfb-run.1uHQXy’
‘~/tmp/scratch/xvfb-run.5HUUNW’ ‘~/tmp/scratch/xvfb-run.5PUnYm’
‘~/tmp/scratch/xvfb-run.5SV5Kp’ ‘~/tmp/scratch/xvfb-run.6GBDKg’
‘~/tmp/scratch/xvfb-run.7Lm1uO’ ‘~/tmp/scratch/xvfb-run.7aTAQi’
‘~/tmp/scratch/xvfb-run.8HRjxe’ ‘~/tmp/scratch/xvfb-run.8asNDb’
‘~/tmp/scratch/xvfb-run.BKNPWn’ ‘~/tmp/scratch/xvfb-run.CMxBo6’
‘~/tmp/scratch/xvfb-run.D30Myq’ ‘~/tmp/scratch/xvfb-run.E2HzLq’
‘~/tmp/scratch/xvfb-run.G5oEHf’ ‘~/tmp/scratch/xvfb-run.G6EZkc’
‘~/tmp/scratch/xvfb-run.Gofk29’ ‘~/tmp/scratch/xvfb-run.H4BAWm’
‘~/tmp/scratch/xvfb-run.HTwbPN’ ‘~/tmp/scratch/xvfb-run.Huljw5’
‘~/tmp/scratch/xvfb-run.JTkDVS’ ‘~/tmp/scratch/xvfb-run.KEaXV9’
‘~/tmp/scratch/xvfb-run.Kdpst3’ ‘~/tmp/scratch/xvfb-run.LBWVb8’
‘~/tmp/scratch/xvfb-run.M0I5fr’ ‘~/tmp/scratch/xvfb-run.MOOeM6’
‘~/tmp/scratch/xvfb-run.N7lM4l’ ‘~/tmp/scratch/xvfb-run.NJaPlA’
‘~/tmp/scratch/xvfb-run.O9GMu2’ ‘~/tmp/scratch/xvfb-run.OKp45o’
‘~/tmp/scratch/xvfb-run.OfyybG’ ‘~/tmp/scratch/xvfb-run.PHu8KK’
‘~/tmp/scratch/xvfb-run.QzPhR5’ ‘~/tmp/scratch/xvfb-run.RZKDDZ’
‘~/tmp/scratch/xvfb-run.SO0EPz’ ‘~/tmp/scratch/xvfb-run.StFzyO’
‘~/tmp/scratch/xvfb-run.T28Vac’ ‘~/tmp/scratch/xvfb-run.TG7MRm’
‘~/tmp/scratch/xvfb-run.TnDrRj’ ‘~/tmp/scratch/xvfb-run.VEggCO’
‘~/tmp/scratch/xvfb-run.VdoQ6x’ ‘~/tmp/scratch/xvfb-run.WRUJ8X’
‘~/tmp/scratch/xvfb-run.WaYbi4’ ‘~/tmp/scratch/xvfb-run.Y7tVvl’
‘~/tmp/scratch/xvfb-run.ZCa6Wc’ ‘~/tmp/scratch/xvfb-run.Zq7AxU’
‘~/tmp/scratch/xvfb-run.ZwGIDZ’ ‘~/tmp/scratch/xvfb-run.aiFQ0C’
‘~/tmp/scratch/xvfb-run.bXvasd’ ‘~/tmp/scratch/xvfb-run.bz6Vz8’
‘~/tmp/scratch/xvfb-run.c23MRC’ ‘~/tmp/scratch/xvfb-run.dlhrYa’
‘~/tmp/scratch/xvfb-run.gKRH7N’ ‘~/tmp/scratch/xvfb-run.gjWNCv’
‘~/tmp/scratch/xvfb-run.hlr0D5’ ‘~/tmp/scratch/xvfb-run.j6q4aE’
‘~/tmp/scratch/xvfb-run.kXcx7F’ ‘~/tmp/scratch/xvfb-run.kZZjsK’
‘~/tmp/scratch/xvfb-run.lGL8jM’ ‘~/tmp/scratch/xvfb-run.mA5zV0’
‘~/tmp/scratch/xvfb-run.neeW9K’ ‘~/tmp/scratch/xvfb-run.nuyi5n’
‘~/tmp/scratch/xvfb-run.oET8tT’ ‘~/tmp/scratch/xvfb-run.pCvLew’
‘~/tmp/scratch/xvfb-run.pZTPv7’ ‘~/tmp/scratch/xvfb-run.pev2KM’
‘~/tmp/scratch/xvfb-run.q3KMZQ’ ‘~/tmp/scratch/xvfb-run.qSJtFk’
‘~/tmp/scratch/xvfb-run.qihWru’ ‘~/tmp/scratch/xvfb-run.qpqY5R’
‘~/tmp/scratch/xvfb-run.tVEyhv’ ‘~/tmp/scratch/xvfb-run.vFrnwF’
‘~/tmp/scratch/xvfb-run.wXwywf’ ‘~/tmp/scratch/xvfb-run.x3aqJe’
‘~/tmp/scratch/xvfb-run.y3tag3’ ‘~/tmp/scratch/xvfb-run.zDTNvs’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 4.1.0
Check: re-building of vignette outputs
Result: FAIL
* DONE
* Status: FAILURE
* using check arguments '--no-clean-on-error '
* elapsed time (check, wall clock): 30:03
* result classification: failed check, errors:no, warnings:no, notes:no
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 4.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘a01_GettingOmopCdmVocabularies.Rmd’ using rmarkdown
--- finished re-building ‘a01_GettingOmopCdmVocabularies.Rmd’
--- re-building ‘a02_ExploreCDMvocabulary.Rmd’ using rmarkdown
--- finished re-building ‘a02_ExploreCDMvocabulary.Rmd’
--- re-building ‘a03_TypesOfCodelist.Rmd’ using rmarkdown
--- finished re-building ‘a03_TypesOfCodelist.Rmd’
--- re-building ‘a04_GenerateCandidateCodelist.Rmd’ using rmarkdown
--- finished re-building ‘a04_GenerateCandidateCodelist.Rmd’
--- re-building ‘a05_GenerateVocabularyBasedCodelist.Rmd’ using rmarkdown
trying URL 'https://cdmconnectordata.blob.core.windows.net/cdmconnector-example-data/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================================
downloaded 565.6 MB
--- finished re-building ‘a05_GenerateVocabularyBasedCodelist.Rmd’
--- re-building ‘a06_ImportExport.Rmd’ using rmarkdown
--- finished re-building ‘a06_ImportExport.Rmd’
--- re-building ‘a08_ManipulateCodelists.Rmd’ using rmarkdown
--- finished re-building ‘a08_ManipulateCodelists.Rmd’
--- re-building ‘a09_RunCodelistDiagnostics.Rmd’ using rmarkdown
--- finished re-building ‘a09_RunCodelistDiagnostics.Rmd’
--- re-building ‘a10_CodelistGeneratorBenchmark.Rmd’ using rmarkdown
trying URL 'https://cdmconnectordata.blob.core.windows.net/cdmconnector-example-data/synpuf-1k_5.3.zip'
Content type 'application/zip' length 593048982 bytes (565.6 MB)
==================================
Quitting from a10_CodelistGeneratorBenchmark.Rmd:17-19 [unnamed-chunk-2]
Execution halted
SUMMARY: processing the following file failed:
‘a10_CodelistGeneratorBenchmark.Rmd’
Error: Vignette re-building failed.
Execution halted
* checking PDF version of manual ...* using check arguments '--no-clean-on-error '
Flavor: r-oldrel-macos-arm64