Last updated on 2026-02-17 08:49:41 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.38 | 52.66 | 367.19 | 419.85 | WARN | |
| r-devel-linux-x86_64-debian-gcc | 0.1.38 | 40.87 | 264.34 | 305.21 | WARN | |
| r-devel-linux-x86_64-fedora-clang | 0.1.39 | 101.00 | 588.91 | 689.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.39 | 86.00 | 513.52 | 599.52 | OK | |
| r-devel-macos-arm64 | 0.1.39 | 15.00 | 103.00 | 118.00 | OK | |
| r-devel-windows-x86_64 | 0.1.39 | 55.00 | 335.00 | 390.00 | OK | |
| r-patched-linux-x86_64 | 0.1.38 | 49.87 | 347.96 | 397.83 | OK | |
| r-release-linux-x86_64 | 0.1.38 | 45.86 | 348.76 | 394.62 | OK | |
| r-release-macos-arm64 | 0.1.39 | 14.00 | 91.00 | 105.00 | ERROR | |
| r-release-macos-x86_64 | 0.1.39 | 42.00 | 700.00 | 742.00 | ERROR | |
| r-release-windows-x86_64 | 0.1.38 | 55.00 | 317.00 | 372.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.39 | 14.00 | 92.00 | 106.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.1.39 | 52.00 | 850.00 | 902.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.1.38 | 73.00 | 445.00 | 518.00 | OK |
Version: 0.1.38
Check: CRAN incoming feasibility
Result: WARN
Maintainer: ‘Sora Yoon <sora.yoon@pennmedicine.upenn.edu>’
Strong dependencies not in the CRAN or BioC software repositories:
TxDb.Hsapiens.UCSC.hg38.knownGene,
TxDb.Mmusculus.UCSC.mm10.knownGene, org.Mm.eg.db, org.Hs.eg.db
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.1.39
Check: examples
Result: ERROR
Running examples in ‘HiCociety-Ex.R’ failed
The error most likely occurred in:
> ### Name: add_Genes
> ### Title: Add gene information
> ### Aliases: add_Genes
>
> ### ** Examples
>
> modulefile = system.file('extdata','mouse_naiveCD4T_Vahedi_short.rds',
+ package = 'HiCocietyExample')
> mycom = readRDS(modulefile)
> mycom$ModuleSummary = add_Genes(mycom$ModuleSummary,
+ 'TxDb.Mmusculus.UCSC.mm10.knownGene')
Error in add_Genes(mycom$ModuleSummary, "TxDb.Mmusculus.UCSC.mm10.knownGene") :
Package TxDb.Mmusculus.UCSC.mm10.knownGene not found
Execution halted
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.1.39
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'TxDb.Hsapiens.UCSC.hg38.knownGene',
'TxDb.Mmusculus.UCSC.mm10.knownGene', 'org.Mm.eg.db'
Flavor: r-oldrel-macos-arm64
Version: 0.1.39
Check: installed package size
Result: NOTE
installed size is 6.6Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.1.39
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'TxDb.Hsapiens.UCSC.hg38.knownGene',
'TxDb.Mmusculus.UCSC.mm10.knownGene'
Flavor: r-oldrel-macos-x86_64