CRAN Package Check Results for Package butcher

Last updated on 2026-08-02 13:49:03 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.0 3.57 121.19 124.76 NOTE
r-devel-linux-x86_64-debian-gcc 0.4.0 2.72 83.76 86.48 NOTE
r-devel-linux-x86_64-fedora-clang 0.4.0 110.99 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4.0 85.81 NOTE
r-devel-windows-x86_64 0.4.0 6.00 98.00 104.00 ERROR
r-patched-linux-x86_64 0.4.0 4.40 117.65 122.05 OK
r-release-linux-x86_64 0.4.0 3.15 117.79 120.94 OK
r-release-macos-arm64 0.4.0 1.00 36.00 37.00 OK
r-release-macos-x86_64 0.4.0 3.00 138.00 141.00 OK
r-release-windows-x86_64 0.4.0 6.00 151.00 157.00 OK
r-oldrel-macos-arm64 0.4.0 1.00 46.00 47.00 OK
r-oldrel-macos-x86_64 0.4.0 3.00 141.00 144.00 OK
r-oldrel-windows-x86_64 0.4.0 8.00 200.00 208.00 OK

Check Details

Version: 0.4.0
Check: R code for possible problems
Result: NOTE Found calls to structure() using deprecated special names: butcher/tests/testthat/test-multnet.R (.Label: 1) butcher/tests/testthat/test-randomForest.R (.Label: 1) butcher/tests/testthat/test-train.R (.Label: 1) '.Label' should be changed to 'levels'. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 0.4.0
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp02cfox’ ‘~/tmp/scratch/Rtmp0ut4X6’ ‘~/tmp/scratch/Rtmp0vHdcX’ ‘~/tmp/scratch/Rtmp0wMUTu’ ‘~/tmp/scratch/Rtmp13FIvA’ ‘~/tmp/scratch/Rtmp2NjzgG’ ‘~/tmp/scratch/Rtmp2YEg2h’ ‘~/tmp/scratch/Rtmp2kFPLx’ ‘~/tmp/scratch/Rtmp2tulrX’ ‘~/tmp/scratch/Rtmp3OuADw’ ‘~/tmp/scratch/Rtmp46gvNS’ ‘~/tmp/scratch/Rtmp4hxK2r’ ‘~/tmp/scratch/Rtmp4seOGx’ ‘~/tmp/scratch/Rtmp4yI9VC’ ‘~/tmp/scratch/Rtmp5rc5hK’ ‘~/tmp/scratch/Rtmp66gLpT’ ‘~/tmp/scratch/Rtmp6Mrfaj’ ‘~/tmp/scratch/Rtmp6Uqd33’ ‘~/tmp/scratch/Rtmp7jHIim’ ‘~/tmp/scratch/Rtmp7mpp8j’ ‘~/tmp/scratch/Rtmp7pQ1Lm’ ‘~/tmp/scratch/Rtmp7uyuXb’ ‘~/tmp/scratch/Rtmp7wl87Y’ ‘~/tmp/scratch/Rtmp8ziivC’ ‘~/tmp/scratch/Rtmp9MSBR0’ ‘~/tmp/scratch/Rtmp9SySpJ’ ‘~/tmp/scratch/Rtmp9eqJ0K’ ‘~/tmp/scratch/RtmpA7GZxH’ ‘~/tmp/scratch/RtmpAZJHLG’ ‘~/tmp/scratch/RtmpB8dhs9’ ‘~/tmp/scratch/RtmpB9gro7’ ‘~/tmp/scratch/RtmpCUh5Md’ ‘~/tmp/scratch/RtmpDYbRbZ’ ‘~/tmp/scratch/RtmpDlrutL’ ‘~/tmp/scratch/RtmpDpfSu2’ ‘~/tmp/scratch/RtmpE8YwE4’ ‘~/tmp/scratch/RtmpEkj5An’ ‘~/tmp/scratch/RtmpFPuEPl’ ‘~/tmp/scratch/RtmpFXs9Ln’ ‘~/tmp/scratch/RtmpFrLLTc’ ‘~/tmp/scratch/RtmpG4f79J’ ‘~/tmp/scratch/RtmpGeuw1F’ ‘~/tmp/scratch/RtmpGxAYOa’ ‘~/tmp/scratch/RtmpH0THIk’ ‘~/tmp/scratch/RtmpHa9PGj’ ‘~/tmp/scratch/RtmpJ4pBIK’ ‘~/tmp/scratch/RtmpJRvffy’ ‘~/tmp/scratch/RtmpJWpgai’ ‘~/tmp/scratch/RtmpKCsXdf’ ‘~/tmp/scratch/RtmpKtvBBp’ ‘~/tmp/scratch/RtmpLayDAh’ ‘~/tmp/scratch/RtmpM0rSYo’ ‘~/tmp/scratch/RtmpMWOS3h’ ‘~/tmp/scratch/RtmpMXDSIJ’ ‘~/tmp/scratch/RtmpOCAE7d’ ‘~/tmp/scratch/RtmpODpD3i’ ‘~/tmp/scratch/RtmpOGYnxb’ ‘~/tmp/scratch/RtmpObcqAv’ ‘~/tmp/scratch/RtmpPW2Unz’ ‘~/tmp/scratch/RtmpPi6b0Y’ ‘~/tmp/scratch/RtmpPwDR0Q’ ‘~/tmp/scratch/RtmpQGLC5k’ ‘~/tmp/scratch/RtmpR79jQb’ ‘~/tmp/scratch/RtmpR7pUJw’ ‘~/tmp/scratch/RtmpRIFQwI’ ‘~/tmp/scratch/RtmpRhUVCw’ ‘~/tmp/scratch/RtmpSCRcMZ’ ‘~/tmp/scratch/RtmpSRZ7J6’ ‘~/tmp/scratch/RtmpSfzB5T’ ‘~/tmp/scratch/RtmpSySHHC’ ‘~/tmp/scratch/RtmpTYxxhS’ ‘~/tmp/scratch/RtmpTbRrNP’ ‘~/tmp/scratch/RtmpTmoq91’ ‘~/tmp/scratch/RtmpToKMEy’ ‘~/tmp/scratch/RtmpU55huc’ ‘~/tmp/scratch/RtmpUKxQUC’ ‘~/tmp/scratch/RtmpUO4jD7’ ‘~/tmp/scratch/RtmpUdIk7f’ ‘~/tmp/scratch/RtmpVAPk9b’ ‘~/tmp/scratch/RtmpVVQrwW’ ‘~/tmp/scratch/RtmpVZycSR’ ‘~/tmp/scratch/RtmpVeb9Wz’ ‘~/tmp/scratch/RtmpVgvQDQ’ ‘~/tmp/scratch/RtmpVtOUiP’ ‘~/tmp/scratch/RtmpW4jko3’ ‘~/tmp/scratch/RtmpW63tTQ’ ‘~/tmp/scratch/RtmpWAj2qO’ ‘~/tmp/scratch/RtmpXtiCNV’ ‘~/tmp/scratch/RtmpY6mwtA’ ‘~/tmp/scratch/RtmpYS0znB’ ‘~/tmp/scratch/RtmpZEPTlT’ ‘~/tmp/scratch/RtmpZbBFbW’ ‘~/tmp/scratch/RtmpZdFgAX’ ‘~/tmp/scratch/RtmpZjKRUb’ ‘~/tmp/scratch/Rtmpa84sdR’ ‘~/tmp/scratch/RtmpaESO4S’ ‘~/tmp/scratch/Rtmpc66mLD’ ‘~/tmp/scratch/RtmpcCrqSj’ ‘~/tmp/scratch/RtmpcewxjV’ ‘~/tmp/scratch/Rtmpe9kAkQ’ ‘~/tmp/scratch/RtmpeTYDcl’ ‘~/tmp/scratch/Rtmpf3hwun’ ‘~/tmp/scratch/Rtmpf3y3HQ’ ‘~/tmp/scratch/Rtmpf59jEu’ ‘~/tmp/scratch/RtmpgTIXdW’ ‘~/tmp/scratch/Rtmpgwe3Sw’ ‘~/tmp/scratch/RtmphA5s9U’ ‘~/tmp/scratch/RtmphFmwmQ’ ‘~/tmp/scratch/RtmphI3z5B’ ‘~/tmp/scratch/Rtmpjfgydv’ ‘~/tmp/scratch/RtmpjgN4Ov’ ‘~/tmp/scratch/RtmpkW1Kq1’ ‘~/tmp/scratch/RtmplZzKBE’ ‘~/tmp/scratch/RtmpmOqm5S’ ‘~/tmp/scratch/RtmpmoH7EU’ ‘~/tmp/scratch/RtmpnwS3GG’ ‘~/tmp/scratch/RtmpoCTAPA’ ‘~/tmp/scratch/RtmpoFORUo’ ‘~/tmp/scratch/RtmpoI7DVn’ ‘~/tmp/scratch/Rtmpoj8892’ ‘~/tmp/scratch/Rtmppscjd2’ ‘~/tmp/scratch/Rtmppx8og5’ ‘~/tmp/scratch/Rtmppxhmlo’ ‘~/tmp/scratch/RtmpqBhlFL’ ‘~/tmp/scratch/Rtmpr1KYHn’ ‘~/tmp/scratch/RtmprofNVC’ ‘~/tmp/scratch/Rtmps2U1VM’ ‘~/tmp/scratch/RtmpsWHql4’ ‘~/tmp/scratch/RtmpsZjSSb’ ‘~/tmp/scratch/RtmpslxQs4’ ‘~/tmp/scratch/Rtmpt4hAwq’ ‘~/tmp/scratch/Rtmpt6q4DT’ ‘~/tmp/scratch/Rtmptt5Gid’ ‘~/tmp/scratch/Rtmpum4Srk’ ‘~/tmp/scratch/RtmpvEbjwa’ ‘~/tmp/scratch/RtmpvjHAIq’ ‘~/tmp/scratch/RtmpvyoPaL’ ‘~/tmp/scratch/RtmpwDhIgm’ ‘~/tmp/scratch/RtmpwIbsEt’ ‘~/tmp/scratch/Rtmpx9Ilv3’ ‘~/tmp/scratch/RtmpxvX4gO’ ‘~/tmp/scratch/RtmpyYxku0’ ‘~/tmp/scratch/xvfb-run.1IGYab’ ‘~/tmp/scratch/xvfb-run.2wqkWi’ ‘~/tmp/scratch/xvfb-run.30T6VW’ ‘~/tmp/scratch/xvfb-run.3LAjT1’ ‘~/tmp/scratch/xvfb-run.53OIrP’ ‘~/tmp/scratch/xvfb-run.5ixhdR’ ‘~/tmp/scratch/xvfb-run.5k1Lrt’ ‘~/tmp/scratch/xvfb-run.6xWntW’ ‘~/tmp/scratch/xvfb-run.7SQqhg’ ‘~/tmp/scratch/xvfb-run.9reaJw’ ‘~/tmp/scratch/xvfb-run.ANP9YD’ ‘~/tmp/scratch/xvfb-run.BKskTR’ ‘~/tmp/scratch/xvfb-run.Fvffi3’ ‘~/tmp/scratch/xvfb-run.ITTA7W’ ‘~/tmp/scratch/xvfb-run.JcOQHq’ ‘~/tmp/scratch/xvfb-run.JfXKIO’ ‘~/tmp/scratch/xvfb-run.Jr8BUF’ ‘~/tmp/scratch/xvfb-run.K4Kr5T’ ‘~/tmp/scratch/xvfb-run.OlwoHG’ ‘~/tmp/scratch/xvfb-run.PLdTJj’ ‘~/tmp/scratch/xvfb-run.QFWouG’ ‘~/tmp/scratch/xvfb-run.QLBO6G’ ‘~/tmp/scratch/xvfb-run.QM8k8y’ ‘~/tmp/scratch/xvfb-run.T9icmA’ ‘~/tmp/scratch/xvfb-run.TDKArv’ ‘~/tmp/scratch/xvfb-run.TTgkzD’ ‘~/tmp/scratch/xvfb-run.VAuqfo’ ‘~/tmp/scratch/xvfb-run.Vq4qD4’ ‘~/tmp/scratch/xvfb-run.XgYRTx’ ‘~/tmp/scratch/xvfb-run.XkwUOz’ ‘~/tmp/scratch/xvfb-run.YDTyHy’ ‘~/tmp/scratch/xvfb-run.ZPPfyF’ ‘~/tmp/scratch/xvfb-run.Ztf9ks’ ‘~/tmp/scratch/xvfb-run.aiQueM’ ‘~/tmp/scratch/xvfb-run.cdG07c’ ‘~/tmp/scratch/xvfb-run.e4DxFT’ ‘~/tmp/scratch/xvfb-run.edh7gG’ ‘~/tmp/scratch/xvfb-run.gpupoP’ ‘~/tmp/scratch/xvfb-run.gwnNU2’ ‘~/tmp/scratch/xvfb-run.iAkCoB’ ‘~/tmp/scratch/xvfb-run.iE3d3w’ ‘~/tmp/scratch/xvfb-run.jecDNu’ ‘~/tmp/scratch/xvfb-run.k70Nr0’ ‘~/tmp/scratch/xvfb-run.khAhlZ’ ‘~/tmp/scratch/xvfb-run.lky2NB’ ‘~/tmp/scratch/xvfb-run.m99xra’ ‘~/tmp/scratch/xvfb-run.mCS161’ ‘~/tmp/scratch/xvfb-run.mxPmkO’ ‘~/tmp/scratch/xvfb-run.o9neo3’ ‘~/tmp/scratch/xvfb-run.rTDbdo’ ‘~/tmp/scratch/xvfb-run.rmDnai’ ‘~/tmp/scratch/xvfb-run.sf2wIA’ ‘~/tmp/scratch/xvfb-run.uNh7eI’ ‘~/tmp/scratch/xvfb-run.ubUZRU’ ‘~/tmp/scratch/xvfb-run.vC8pi0’ ‘~/tmp/scratch/xvfb-run.vGrtX4’ ‘~/tmp/scratch/xvfb-run.wCxjf4’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.4.0
Check: examples
Result: ERROR Running examples in 'butcher-Ex.R' failed The error most likely occurred in: > ### Name: axe-bart > ### Title: Axing a bart model. > ### Aliases: axe-bart axe_call.bart axe_fitted.bart > > ### ** Examples > > ## Don't show: > if (rlang::is_installed("dbarts")) withAutoprint({ # examplesIf + ## End(Don't show) + library(dbarts) + x <- dbarts::bart(mtcars[,2:5], mtcars[,1], verbose = FALSE, keeptrees = TRUE) + res <- butcher(x, verbose = TRUE) + ## Don't show: + }) # examplesIf > library(dbarts) > x <- dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE, keeptrees = TRUE) Error in parse(text = deparse(RNGkind)[-1L]) : <text>:1:22: unexpected ')' 1: binom.kind = NULL) ^ Calls: withAutoprint ... validObject -> anyStrings -> isTRUE -> validityMethod -> parse Execution halted Flavor: r-devel-windows-x86_64

Version: 0.4.0
Check: tests
Result: ERROR Running 'testthat.R' [18s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(butcher) > > test_check("butcher") Saving _problems/test-bart-5.R Saving _problems/test-bart-16.R Saving _problems/test-bart-26.R Saving _problems/test-bart-39.R Saving _problems/test-bart-55.R 1 package (dimRed) is needed for this step but is not installed. To install run: `install.packages("dimRed")` [ FAIL 5 | WARN 0 | SKIP 44 | PASS 198 ] ══ Skipped tests (44) ══════════════════════════════════════════════════════════ • On CRAN (43): 'test-c5.R:2:3', 'test-earth.R:2:3', 'test-earth.R:31:3', 'test-elnet.R:2:3', 'test-flexsurvreg.R:2:3', 'test-flexsurvreg.R:18:3', 'test-flexsurvreg.R:56:3', 'test-gausspr.R:2:3', 'test-glmnet.R:2:3', 'test-kknn.R:2:3', 'test-klaR.R:2:3', 'test-klaR.R:16:3', 'test-ksvm.R:2:3', 'test-mda.R:2:3', 'test-mda.R:24:3', 'test-mda.R:98:3', 'test-mixOmics.R:2:3', 'test-mixOmics.R:21:3', 'test-mixOmics.R:40:3', 'test-multnet.R:2:3', 'test-new.R:1:1', 'test-nnet.R:2:3', 'test-randomForest.R:2:3', 'test-rpart.R:2:3', 'test-rpart.R:22:3', 'test-rsample.R:1:1', 'test-rsample.R:21:1', 'test-rsample.R:34:1', 'test-rsample.R:55:1', 'test-rsample.R:72:1', 'test-sclass.R:2:3', 'test-survreg.R:2:3', 'test-survreg.penal.R:2:3', 'test-tabnet_fit.R:2:3', 'test-tabnet_fit.R:20:3', 'test-tabnet_fit.R:37:3', 'test-train.R:2:3', 'test-train.R:44:3', 'test-train.recipe.R:9:3', 'test-ui.R:1:1', 'test-weigh.R:1:1', 'test-xgb.R:6:3', 'test-xgb.R:51:3' • {mixOmics} is not installed (1): 'test-recipe.R:454:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-bart.R:5:3'): dbarts + axe_call() works ──────────────────────── Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')' 1: binom.kind = NULL) ^ Backtrace: ▆ 1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE) at test-bart.R:5:3 2. └─dbarts::dbartsControl(...) 3. └─methods::new(...) 4. ├─methods::initialize(value, ...) 5. └─dbarts (local) initialize(value, ...) 6. ├─methods::callNextMethod() 7. └─methods (local) .nextMethod(.Object = .Object, ... = ...) 8. └─methods::validObject(.Object) 9. ├─methods (local) anyStrings(validityMethod(object)) 10. │ └─base::isTRUE(x) 11. └─dbarts (local) validityMethod(object) 12. └─base::parse(text = deparse(RNGkind)[-1L]) ── Error ('test-bart.R:11:3'): dbarts + axe_fitted() works ───────────────────── Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')' 1: binom.kind = NULL) ^ Backtrace: ▆ 1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], mtcars[1:5, 2:5], verbose = FALSE) at test-bart.R:11:3 2. └─dbarts::dbartsControl(...) 3. └─methods::new(...) 4. ├─methods::initialize(value, ...) 5. └─dbarts (local) initialize(value, ...) 6. ├─methods::callNextMethod() 7. └─methods (local) .nextMethod(.Object = .Object, ... = ...) 8. └─methods::validObject(.Object) 9. ├─methods (local) anyStrings(validityMethod(object)) 10. │ └─base::isTRUE(x) 11. └─dbarts (local) validityMethod(object) 12. └─base::parse(text = deparse(RNGkind)[-1L]) ── Error ('test-bart.R:26:3'): dbarts + butcher() works ──────────────────────── Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')' 1: binom.kind = NULL) ^ Backtrace: ▆ 1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE) at test-bart.R:26:3 2. └─dbarts::dbartsControl(...) 3. └─methods::new(...) 4. ├─methods::initialize(value, ...) 5. └─dbarts (local) initialize(value, ...) 6. ├─methods::callNextMethod() 7. └─methods (local) .nextMethod(.Object = .Object, ... = ...) 8. └─methods::validObject(.Object) 9. ├─methods (local) anyStrings(validityMethod(object)) 10. │ └─base::isTRUE(x) 11. └─dbarts (local) validityMethod(object) 12. └─base::parse(text = deparse(RNGkind)[-1L]) ── Error ('test-bart.R:34:3'): dbarts + predict() works ──────────────────────── Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')' 1: binom.kind = NULL) ^ Backtrace: ▆ 1. └─dbarts::bart(mtcars[, 2:5], mtcars[, 1], verbose = FALSE, keeptrees = TRUE) at test-bart.R:34:3 2. └─dbarts::dbartsControl(...) 3. └─methods::new(...) 4. ├─methods::initialize(value, ...) 5. └─dbarts (local) initialize(value, ...) 6. ├─methods::callNextMethod() 7. └─methods (local) .nextMethod(.Object = .Object, ... = ...) 8. └─methods::validObject(.Object) 9. ├─methods (local) anyStrings(validityMethod(object)) 10. │ └─base::isTRUE(x) 11. └─dbarts (local) validityMethod(object) 12. └─base::parse(text = deparse(RNGkind)[-1L]) ── Error ('test-bart.R:55:3'): bart() from parsnip + predict() works ─────────── Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')' 1: binom.kind = NULL) ^ Backtrace: ▆ 1. ├─generics::fit(spec, mpg ~ ., mtcars) at test-bart.R:55:3 2. ├─parsnip::fit.model_spec(spec, mpg ~ ., mtcars) 3. │ └─parsnip:::form_xy(...) 4. │ └─parsnip:::xy_xy(...) 5. │ └─parsnip:::eval_mod(...) 6. │ └─rlang::eval_tidy(e, env = envir, ...) 7. └─dbarts::bart(...) 8. └─dbarts::dbartsControl(...) 9. └─methods::new(...) 10. ├─methods::initialize(value, ...) 11. └─dbarts (local) initialize(value, ...) 12. ├─methods::callNextMethod() 13. └─methods (local) .nextMethod(.Object = .Object, ... = ...) 14. └─methods::validObject(.Object) 15. ├─methods (local) anyStrings(validityMethod(object)) 16. │ └─base::isTRUE(x) 17. └─dbarts (local) validityMethod(object) 18. └─base::parse(text = deparse(RNGkind)[-1L]) [ FAIL 5 | WARN 0 | SKIP 44 | PASS 198 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64