Last updated on 2026-10-30 16:53:25 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0-3 | 1.29 | 400.83 | 402.12 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0-3 | 1.01 | 270.37 | 271.38 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0-3 | 285.92 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0-3 | 289.50 | ERROR | |||
| r-devel-windows-x86_64 | 1.0-3 | 3.00 | 408.00 | 411.00 | OK | |
| r-patched-linux-x86_64 | 1.0-3 | 1.04 | 388.85 | 389.89 | OK | |
| r-release-linux-x86_64 | 1.0-3 | 1.21 | 370.38 | 371.59 | NOTE | |
| r-release-macos-arm64 | 1.0-3 | 0.00 | 87.00 | 87.00 | NOTE | |
| r-release-macos-x86_64 | 1.0-3 | 1.00 | 454.00 | 455.00 | NOTE | |
| r-release-windows-x86_64 | 1.0-3 | 4.00 | 343.00 | 347.00 | NOTE |
Version: 1.0-3
Check: tests
Result: ERROR
Running ‘KM.R’ [5s/11s]
Running ‘bugfixes.R’
Running ‘confint.R’ [10s/25s]
Comparing ‘confint.Rout’ to ‘confint.Rout.save’ ... OK
Running ‘csep.R’ [11s/24s]
Running ‘edges.R’
Running ‘empirical.R’ [10s/22s]
Comparing ‘empirical.Rout’ to ‘empirical.Rout.save’ ...
14,20d13
<
< Attaching package: 'survival'
<
< The following object is masked from 'package:rms':
<
< cluster
<
Running ‘exact.R’ [16s/39s]
Comparing ‘exact.Rout’ to ‘exact.Rout.save’ ... OK
Running ‘free1way-Ex.R’ [7s/15s]
Comparing ‘free1way-Ex.Rout’ to ‘free1way-Ex.Rout.save’ ... OK
Running ‘glm.R’
Comparing ‘glm.Rout’ to ‘glm.Rout.save’ ... OK
Running ‘jobsatisfaction.R’
Comparing ‘jobsatisfaction.Rout’ to ‘jobsatisfaction.Rout.save’ ... OK
Running ‘logrank.R’ [4s/12s]
Comparing ‘logrank.Rout’ to ‘logrank.Rout.save’ ... OK
Running ‘polr.R’ [11s/23s]
Comparing ‘polr.Rout’ to ‘polr.Rout.save’ ... OK
Running ‘power.R’ [68s/175s]
Comparing ‘power.Rout’ to ‘power.Rout.save’ ... OK
Running ‘speed.R’ [4s/11s]
Running the tests in ‘tests/speed.R’ failed.
Complete output:
>
> pkgs <- c("free1way.docreg", "rms")
> if (!all(sapply(pkgs, require, character.only = TRUE)))
+ quit()
Loading required package: free1way.docreg
Loading required package: bibtex
Loading required package: rms
Loading required package: Hmisc
Attaching package: 'Hmisc'
The following objects are masked from 'package:base':
format.pval, units
>
> set.seed(2908)
>
> ### speed comparisons for larger sample sizes
> N <- 20000
> K <- floor(N / 10)
>
> ### categorical, rfree1way is faster
> d <- rfree1way(n = N, delta = .25, prob = rep(1 / K, K))
> system.time(m0 <- free1way(y ~ groups, data = d))
user system elapsed
0.169 0.016 0.693
> system.time(m1 <- orm(y ~ groups, data = d))
user system elapsed
0.157 0.009 0.514
>
> stopifnot(isTRUE(all.equal(c(logLik(m0)), c(logLik(m1)))))
Error: isTRUE(all.equal(c(logLik(m0)), c(logLik(m1)))) is not TRUE
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0-3
Check: tests
Result: ERROR
Running ‘KM.R’ [4s/14s]
Running ‘bugfixes.R’
Running ‘confint.R’ [9s/14s]
Comparing ‘confint.Rout’ to ‘confint.Rout.save’ ... OK
Running ‘csep.R’ [11s/26s]
Running ‘edges.R’
Running ‘empirical.R’ [10s/25s]
Comparing ‘empirical.Rout’ to ‘empirical.Rout.save’ ...
14,20d13
<
< Attaching package: 'survival'
<
< The following object is masked from 'package:rms':
<
< cluster
<
Running ‘exact.R’ [16s/38s]
Comparing ‘exact.Rout’ to ‘exact.Rout.save’ ... OK
Running ‘free1way-Ex.R’ [7s/15s]
Comparing ‘free1way-Ex.Rout’ to ‘free1way-Ex.Rout.save’ ... OK
Running ‘glm.R’
Comparing ‘glm.Rout’ to ‘glm.Rout.save’ ... OK
Running ‘jobsatisfaction.R’
Comparing ‘jobsatisfaction.Rout’ to ‘jobsatisfaction.Rout.save’ ... OK
Running ‘logrank.R’ [4s/11s]
Comparing ‘logrank.Rout’ to ‘logrank.Rout.save’ ... OK
Running ‘polr.R’ [10s/31s]
Comparing ‘polr.Rout’ to ‘polr.Rout.save’ ... OK
Running ‘power.R’ [69s/201s]
Comparing ‘power.Rout’ to ‘power.Rout.save’ ... OK
Running ‘speed.R’ [4s/13s]
Running the tests in ‘tests/speed.R’ failed.
Complete output:
>
> pkgs <- c("free1way.docreg", "rms")
> if (!all(sapply(pkgs, require, character.only = TRUE)))
+ quit()
Loading required package: free1way.docreg
Loading required package: bibtex
Loading required package: rms
Loading required package: Hmisc
Attaching package: 'Hmisc'
The following objects are masked from 'package:base':
format.pval, units
>
> set.seed(2908)
>
> ### speed comparisons for larger sample sizes
> N <- 20000
> K <- floor(N / 10)
>
> ### categorical, rfree1way is faster
> d <- rfree1way(n = N, delta = .25, prob = rep(1 / K, K))
> system.time(m0 <- free1way(y ~ groups, data = d))
user system elapsed
0.152 0.020 0.663
> system.time(m1 <- orm(y ~ groups, data = d))
user system elapsed
0.168 0.002 0.522
>
> stopifnot(isTRUE(all.equal(c(logLik(m0)), c(logLik(m1)))))
Error: isTRUE(all.equal(c(logLik(m0)), c(logLik(m1)))) is not TRUE
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.0-3
Check: tests
Result: NOTE
Running ‘KM.R’ [5s/7s]
Running ‘bugfixes.R’ [3s/3s]
Running ‘confint.R’ [11s/13s]
Comparing ‘confint.Rout’ to ‘confint.Rout.save’ ... OK
Running ‘csep.R’ [13s/15s]
Running ‘edges.R’ [2s/3s]
Running ‘empirical.R’ [12s/16s]
Comparing ‘empirical.Rout’ to ‘empirical.Rout.save’ ... OK
Running ‘exact.R’ [23s/26s]
Comparing ‘exact.Rout’ to ‘exact.Rout.save’ ... OK
Running ‘free1way-Ex.R’ [9s/15s]
Comparing ‘free1way-Ex.Rout’ to ‘free1way-Ex.Rout.save’ ...
54,58c54,60
< log-odds ratio Std. Error z value P(>|z|)
< Month6 0.81236 0.64415 1.26113 0.2073
< Month7 2.52816 0.53153 4.75639 0.0000
< Month8 2.38260 0.53370 4.46432 0.0000
< Month9 0.75132 0.47177 1.59256 0.1113
---
> log-odds ratio Std. Error z value Pr(>|z|)
> Month6 0.81236 0.64415 1.2611 0.2073
> Month7 2.52816 0.53153 4.7564 1.971e-06 ***
> Month8 2.38260 0.53370 4.4643 8.032e-06 ***
> Month9 0.75132 0.47177 1.5926 0.1113
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
101,103c103,107
< log-odds ratio Std. Error z value P(>|z|)
< meNarrow Angle -1.26528 0.68264 -1.85352 0.0638
< meWide Angle -3.28920 0.79367 -4.14428 0.0000
---
> log-odds ratio Std. Error z value Pr(>|z|)
> meNarrow Angle -1.26528 0.68264 -1.8535 0.06381 .
> meWide Angle -3.28920 0.79367 -4.1443 3.409e-05 ***
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
150,151c154,157
< log-odds ratio Std. Error z value P(>|z|)
< survey2nd 1.11258 0.19128 5.81639 0
---
> log-odds ratio Std. Error z value Pr(>|z|)
> survey2nd 1.11258 0.19128 5.8164 6.013e-09 ***
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
213,216c219,224
< log-odds ratio Std. Error z value P(>|z|)
< Income5000-15000 0.10794 0.55953 0.19290 0.8470
< Income15000-25000 1.45998 0.62561 2.33369 0.0196
< Income>25000 1.23282 0.65693 1.87663 0.0606
---
> log-odds ratio Std. Error z value Pr(>|z|)
> Income5000-15000 0.10794 0.55953 0.1929 0.84703
> Income15000-25000 1.45998 0.62561 2.3337 0.01961 *
> Income>25000 1.23282 0.65693 1.8766 0.06057 .
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
Running ‘glm.R’ [3s/4s]
Comparing ‘glm.Rout’ to ‘glm.Rout.save’ ... OK
Running ‘jobsatisfaction.R’ [3s/4s]
Comparing ‘jobsatisfaction.Rout’ to ‘jobsatisfaction.Rout.save’ ... OK
Running ‘logrank.R’ [5s/7s]
Comparing ‘logrank.Rout’ to ‘logrank.Rout.save’ ... OK
Running ‘polr.R’ [15s/17s]
Comparing ‘polr.Rout’ to ‘polr.Rout.save’ ... OK
Running ‘power.R’ [96s/116s]
Comparing ‘power.Rout’ to ‘power.Rout.save’ ... OK
Running ‘speed.R’ [8s/9s]
Flavor: r-release-linux-x86_64
Version: 1.0-3
Check: tests
Result: NOTE
Running ‘KM.R’ [1s/1s]
Running ‘bugfixes.R’ [1s/1s]
Running ‘confint.R’ [2s/2s]
Comparing ‘confint.Rout’ to ‘confint.Rout.save’ ... OK
Running ‘csep.R’ [2s/2s]
Running ‘edges.R’ [1s/1s]
Running ‘empirical.R’ [3s/4s]
Comparing ‘empirical.Rout’ to ‘empirical.Rout.save’ ... OK
Running ‘exact.R’ [4s/6s]
Comparing ‘exact.Rout’ to ‘exact.Rout.save’ ... OK
Running ‘free1way-Ex.R’ [2s/2s]
Comparing ‘free1way-Ex.Rout’ to ‘free1way-Ex.Rout.save’ ...
54,58c54,60
< log-odds ratio Std. Error z value P(>|z|)
< Month6 0.81236 0.64415 1.26113 0.2073
< Month7 2.52816 0.53153 4.75639 0.0000
< Month8 2.38260 0.53370 4.46432 0.0000
< Month9 0.75132 0.47177 1.59256 0.1113
---
> log-odds ratio Std. Error z value Pr(>|z|)
> Month6 0.81236 0.64415 1.2611 0.2073
> Month7 2.52816 0.53153 4.7564 1.971e-06 ***
> Month8 2.38260 0.53370 4.4643 8.032e-06 ***
> Month9 0.75132 0.47177 1.5926 0.1113
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
101,103c103,107
< log-odds ratio Std. Error z value P(>|z|)
< meNarrow Angle -1.26528 0.68264 -1.85352 0.0638
< meWide Angle -3.28920 0.79367 -4.14428 0.0000
---
> log-odds ratio Std. Error z value Pr(>|z|)
> meNarrow Angle -1.26528 0.68264 -1.8535 0.06381 .
> meWide Angle -3.28920 0.79367 -4.1443 3.409e-05 ***
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
150,151c154,157
< log-odds ratio Std. Error z value P(>|z|)
< survey2nd 1.11258 0.19128 5.81639 0
---
> log-odds ratio Std. Error z value Pr(>|z|)
> survey2nd 1.11258 0.19128 5.8164 6.013e-09 ***
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
213,216c219,224
< log-odds ratio Std. Error z value P(>|z|)
< Income5000-15000 0.10794 0.55953 0.19290 0.8470
< Income15000-25000 1.45998 0.62561 2.33369 0.0196
< Income>25000 1.23282 0.65693 1.87663 0.0606
---
> log-odds ratio Std. Error z value Pr(>|z|)
> Income5000-15000 0.10794 0.55953 0.1929 0.84703
> Income15000-25000 1.45998 0.62561 2.3337 0.01961 *
> Income>25000 1.23282 0.65693 1.8766 0.06057 .
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
Running ‘glm.R’ [1s/1s]
Comparing ‘glm.Rout’ to ‘glm.Rout.save’ ... OK
Running ‘jobsatisfaction.R’ [1s/1s]
Comparing ‘jobsatisfaction.Rout’ to ‘jobsatisfaction.Rout.save’ ... OK
Running ‘logrank.R’ [1s/2s]
Comparing ‘logrank.Rout’ to ‘logrank.Rout.save’ ... OK
Running ‘polr.R’ [3s/3s]
Comparing ‘polr.Rout’ to ‘polr.Rout.save’ ... OK
Running ‘power.R’ [17s/17s]
Comparing ‘power.Rout’ to ‘power.Rout.save’ ... OK
Running ‘speed.R’ [2s/2s]
Flavor: r-release-macos-arm64
Version: 1.0-3
Check: tests
Result: NOTE
Running ‘KM.R’ [4s/11s]
Running ‘bugfixes.R’ [2s/5s]
Running ‘confint.R’ [8s/22s]
Comparing ‘confint.Rout’ to ‘confint.Rout.save’ ... OK
Running ‘csep.R’ [9s/19s]
Running ‘edges.R’ [2s/4s]
Running ‘empirical.R’ [9s/23s]
Comparing ‘empirical.Rout’ to ‘empirical.Rout.save’ ... OK
Running ‘exact.R’ [14s/27s]
Comparing ‘exact.Rout’ to ‘exact.Rout.save’ ... OK
Running ‘free1way-Ex.R’ [6s/15s]
Comparing ‘free1way-Ex.Rout’ to ‘free1way-Ex.Rout.save’ ...
54,58c54,60
< log-odds ratio Std. Error z value P(>|z|)
< Month6 0.81236 0.64415 1.26113 0.2073
< Month7 2.52816 0.53153 4.75639 0.0000
< Month8 2.38260 0.53370 4.46432 0.0000
< Month9 0.75132 0.47177 1.59256 0.1113
---
> log-odds ratio Std. Error z value Pr(>|z|)
> Month6 0.81236 0.64415 1.2611 0.2073
> Month7 2.52816 0.53153 4.7564 1.971e-06 ***
> Month8 2.38260 0.53370 4.4643 8.032e-06 ***
> Month9 0.75132 0.47177 1.5926 0.1113
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
101,103c103,107
< log-odds ratio Std. Error z value P(>|z|)
< meNarrow Angle -1.26528 0.68264 -1.85352 0.0638
< meWide Angle -3.28920 0.79367 -4.14428 0.0000
---
> log-odds ratio Std. Error z value Pr(>|z|)
> meNarrow Angle -1.26528 0.68264 -1.8535 0.06381 .
> meWide Angle -3.28920 0.79367 -4.1443 3.409e-05 ***
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
150,151c154,157
< log-odds ratio Std. Error z value P(>|z|)
< survey2nd 1.11258 0.19128 5.81639 0
---
> log-odds ratio Std. Error z value Pr(>|z|)
> survey2nd 1.11258 0.19128 5.8164 6.013e-09 ***
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
213,216c219,224
< log-odds ratio Std. Error z value P(>|z|)
< Income5000-15000 0.10794 0.55953 0.19290 0.8470
< Income15000-25000 1.45998 0.62561 2.33369 0.0196
< Income>25000 1.23282 0.65693 1.87663 0.0606
---
> log-odds ratio Std. Error z value Pr(>|z|)
> Income5000-15000 0.10794 0.55953 0.1929 0.84703
> Income15000-25000 1.45998 0.62561 2.3337 0.01961 *
> Income>25000 1.23282 0.65693 1.8766 0.06057 .
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
Running ‘glm.R’ [2s/5s]
Comparing ‘glm.Rout’ to ‘glm.Rout.save’ ... OK
Running ‘jobsatisfaction.R’ [2s/5s]
Comparing ‘jobsatisfaction.Rout’ to ‘jobsatisfaction.Rout.save’ ... OK
Running ‘logrank.R’ [3s/7s]
Comparing ‘logrank.Rout’ to ‘logrank.Rout.save’ ... OK
Running ‘polr.R’ [9s/14s]
Comparing ‘polr.Rout’ to ‘polr.Rout.save’ ... OK
Running ‘power.R’ [58s/97s]
Comparing ‘power.Rout’ to ‘power.Rout.save’ ... OK
Running ‘speed.R’ [7s/11s]
Flavor: r-release-macos-x86_64
Version: 1.0-3
Check: tests
Result: NOTE
Running 'KM.R' [5s]
Running 'bugfixes.R' [2s]
Running 'confint.R' [9s]
Comparing 'confint.Rout' to 'confint.Rout.save' ... OK
Running 'csep.R' [9s]
Running 'edges.R' [2s]
Running 'empirical.R' [11s]
Comparing 'empirical.Rout' to 'empirical.Rout.save' ... OK
Running 'exact.R' [18s]
Comparing 'exact.Rout' to 'exact.Rout.save' ... OK
Running 'free1way-Ex.R' [7s]
Comparing 'free1way-Ex.Rout' to 'free1way-Ex.Rout.save' ...
54,58c54,60
< log-odds ratio Std. Error z value P(>|z|)
< Month6 0.81236 0.64415 1.26113 0.2073
< Month7 2.52816 0.53153 4.75639 0.0000
< Month8 2.38260 0.53370 4.46432 0.0000
< Month9 0.75132 0.47177 1.59256 0.1113
---
> log-odds ratio Std. Error z value Pr(>|z|)
> Month6 0.81236 0.64415 1.2611 0.2073
> Month7 2.52816 0.53153 4.7564 1.971e-06 ***
> Month8 2.38260 0.53370 4.4643 8.032e-06 ***
> Month9 0.75132 0.47177 1.5926 0.1113
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
101,103c103,107
< log-odds ratio Std. Error z value P(>|z|)
< meNarrow Angle -1.26528 0.68264 -1.85352 0.0638
< meWide Angle -3.28920 0.79367 -4.14428 0.0000
---
> log-odds ratio Std. Error z value Pr(>|z|)
> meNarrow Angle -1.26528 0.68264 -1.8535 0.06381 .
> meWide Angle -3.28920 0.79367 -4.1443 3.409e-05 ***
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
150,151c154,157
< log-odds ratio Std. Error z value P(>|z|)
< survey2nd 1.11258 0.19128 5.81639 0
---
> log-odds ratio Std. Error z value Pr(>|z|)
> survey2nd 1.11258 0.19128 5.8164 6.013e-09 ***
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
213,216c219,224
< log-odds ratio Std. Error z value P(>|z|)
< Income5000-15000 0.10794 0.55953 0.19290 0.8470
< Income15000-25000 1.45998 0.62561 2.33369 0.0196
< Income>25000 1.23282 0.65693 1.87663 0.0606
---
> log-odds ratio Std. Error z value Pr(>|z|)
> Income5000-15000 0.10794 0.55953 0.1929 0.84703
> Income15000-25000 1.45998 0.62561 2.3337 0.01961 *
> Income>25000 1.23282 0.65693 1.8766 0.06057 .
> ---
> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
Running 'glm.R' [3s]
Comparing 'glm.Rout' to 'glm.Rout.save' ... OK
Running 'jobsatisfaction.R' [3s]
Comparing 'jobsatisfaction.Rout' to 'jobsatisfaction.Rout.save' ... OK
Running 'logrank.R' [4s]
Comparing 'logrank.Rout' to 'logrank.Rout.save' ... OK
Running 'polr.R' [11s]
Comparing 'polr.Rout' to 'polr.Rout.save' ... OK
Running 'power.R' [88s]
Comparing 'power.Rout' to 'power.Rout.save' ... OK
Running 'speed.R' [8s]
Flavor: r-release-windows-x86_64