CRAN Package Check Results for Maintainer ‘Laure Cougnaud <laure.cougnaud at openanalytics.eu>’

Last updated on 2025-07-15 09:51:56 CEST.

Package ERROR NOTE OK
clinDataReview 3 10
clinUtils 9 4
inTextSummaryTable 9 4
mpm 13
nlcv 1 12
patientProfilesVis 1 3 9

Package clinDataReview

Current CRAN status: NOTE: 3, OK: 10

Version: 1.6.2
Check: installed package size
Result: NOTE installed size is 5.7Mb sub-directories of 1Mb or more: doc 4.3Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package clinUtils

Current CRAN status: NOTE: 9, OK: 4

Version: 0.2.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: knitPrintListObjects.Rd: knitr Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Version: 0.2.0
Check: installed package size
Result: NOTE installed size is 7.6Mb sub-directories of 1Mb or more: doc 6.5Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package inTextSummaryTable

Current CRAN status: NOTE: 9, OK: 4

Version: 3.3.3
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: inTextSummaryTable-stats.Rd: roundHalfUpTextFormat Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Version: 3.3.3
Check: installed package size
Result: NOTE installed size is 10.2Mb sub-directories of 1Mb or more: doc 9.7Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package mpm

Current CRAN status: OK: 13

Package nlcv

Current CRAN status: ERROR: 1, OK: 12

Version: 0.3.6
Check: package dependencies
Result: ERROR Package required but not available: ‘MLInterfaces’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-release-macos-x86_64

Package patientProfilesVis

Current CRAN status: ERROR: 1, NOTE: 3, OK: 9

Version: 2.0.9
Check: tests
Result: ERROR Running 'testthat.R' [68s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(patientProfilesVis) > > test_check("patientProfilesVis") [ FAIL 1 | WARN 0 | SKIP 20 | PASS 368 ] == Skipped tests (20) ================================================================================================================================================================================== * On CRAN (20): 'test_createSubjectProfileReport.R:46:2', 'test_createSubjectProfileReport.R:82:2', 'test_createSubjectProfileReport.R:124:2', 'test_createSubjectProfileReport.R:154:2', 'test_createSubjectProfileReport.R:197:2', 'test_createSubjectProfileReport.R:252:2', 'test_createSubjectProfileReport.R:316:2', 'test_createSubjectProfileReport.R:381:2', 'test_createSubjectProfileReport.R:420:2', 'test_createSubjectProfileReport.R:475:2', 'test_createSubjectProfileReport.R:531:2', 'test_createSubjectProfileReport.R:570:2', 'test_createSubjectProfileReport.R:622:2', 'test_createSubjectProfileReport.R:671:2', 'test_createSubjectProfileReport.R:723:2', 'test_createSubjectProfileReport.R:775:2', 'test_createSubjectProfileReport.R:820:2', 'test_createSubjectProfileReport.R:878:2', 'test_createSubjectProfileReport.R:908:2', 'test_createSubjectProfileReport.R:939:2' == Failed tests ======================================================================================================================================================================================== -- Error ('test_subjectProfileCombine.R:187:2'): Subject profiles are successfully combined in a parallel framework ------------------------------------------------------------------------------------ Error in `serverSocket(port = port)`: creation of server socket failed: port 11266 cannot be opened Backtrace: x 1. +-testthat::expect_silent(...) at test_subjectProfileCombine.R:187:9 2. | \-testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. | +-testthat (local) .capture(...) 4. | | +-withr::with_output_sink(...) 5. | | | \-base::force(code) 6. | | +-base::withCallingHandlers(...) 7. | | \-base::withVisible(code) 8. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. \-patientProfilesVis::subjectProfileCombine(listPlots, nCores = 2) 10. \-patientProfilesVis:::combineVerticallyGGplot(...) 11. \-parallel::makeCluster(nCores) 12. \-parallel::makePSOCKcluster(names = spec, ...) 13. \-base::serverSocket(port = port) [ FAIL 1 | WARN 0 | SKIP 20 | PASS 368 ] Error: Test failures Execution halted Flavor: r-release-windows-x86_64

Version: 2.0.9
Check: installed package size
Result: NOTE installed size is 5.6Mb sub-directories of 1Mb or more: doc 5.2Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64