Last updated on 2026-04-24 23:54:33 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.04 | 304.90 | 319.94 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.33 | 255.69 | 267.02 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 300.78 | 323.78 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 341.93 | 373.93 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 345.71 | 360.26 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 334.90 | 349.10 | OK | |
| r-release-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 598.00 | 610.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 188.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 593.00 | 606.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/544s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.621, system: 0.042, elapsed: 2.869 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.627, system: 0.066, elapsed: 13.510 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.016, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.436, system: 0.839, elapsed: 112.202 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.004, elapsed: 0.332 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.679, system: 0.991, elapsed: 130.086 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.646, system: 0.031, elapsed: 2.314 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.676, system: 0.079, elapsed: 13.318 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.015, elapsed: 1.117 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.319, system: 0.801, elapsed: 112.046 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.003, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.614, system: 0.946, elapsed: 129.809 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.512, system: 0.030, elapsed: 2.364 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.660, system: 0.067, elapsed: 13.129 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.017, elapsed: 1.172 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.334, system: 0.829, elapsed: 78.412 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.239 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.259, system: 0.253, elapsed: 0.987 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.832, system: 1.220, elapsed: 97.228 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.581, system: 0.033, elapsed: 1.992 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.637, system: 0.060, elapsed: 13.678 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.231, system: 0.018, elapsed: 1.066 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.247, system: 0.887, elapsed: 125.897 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.003, elapsed: 0.209 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.975, system: 0.663, elapsed: 35.207 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.547, system: 1.692, elapsed: 178.880 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [115s/525s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.570, system: 0.053, elapsed: 2.424 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.825, system: 0.202, elapsed: 16.024 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.023, elapsed: 0.342 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.857, system: 1.121, elapsed: 13.877 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.010, elapsed: 0.301 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.276, system: 1.516, elapsed: 34.060 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.855, system: 0.111, elapsed: 4.288 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.079, system: 0.320, elapsed: 18.141 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.270, system: 0.045, elapsed: 0.505 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.801, system: 1.805, elapsed: 99.425 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.012, elapsed: 0.474 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.864, system: 2.514, elapsed: 124.394 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.644, system: 0.071, elapsed: 3.801 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.104, system: 0.232, elapsed: 23.483 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.233, system: 0.032, elapsed: 1.325 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.509, system: 2.131, elapsed: 138.763 seconds]
Computing values for grid cells...
... done. [user: 0.207, system: 0.029, elapsed: 0.603 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.486, system: 0.441, elapsed: 2.750 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.010, system: 3.460, elapsed: 173.876 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.639, system: 0.068, elapsed: 3.160 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.952, system: 0.131, elapsed: 16.735 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.021, elapsed: 0.989 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.029, system: 1.858, elapsed: 107.909 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.011, elapsed: 0.327 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.525, system: 1.248, elapsed: 50.073 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.297, system: 3.500, elapsed: 180.721 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64