CRAN Package Check Results for Package vcfppR

Last updated on 2026-08-02 04:49:44 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.8.3 115.49 70.76 186.25 OK
r-devel-linux-x86_64-debian-gcc 0.8.3 102.18 52.94 155.12 NOTE
r-devel-linux-x86_64-fedora-clang 0.8.3 157.00 114.15 271.15 OK
r-devel-linux-x86_64-fedora-gcc 0.8.3 105.00 48.74 153.74 WARN
r-devel-windows-x86_64 0.8.3 208.00 108.00 316.00 OK
r-patched-linux-x86_64 0.8.3 136.68 67.34 204.02 OK
r-release-linux-x86_64 0.8.3 142.87 66.73 209.60 OK
r-release-macos-arm64 0.8.3 28.00 11.00 39.00 OK
r-release-macos-x86_64 0.8.3 94.00 86.00 180.00 OK
r-release-windows-x86_64 0.8.3 214.00 110.00 324.00 OK
r-oldrel-macos-arm64 0.8.3 25.00 14.00 39.00 OK
r-oldrel-macos-x86_64 0.8.3 98.00 55.00 153.00 OK
r-oldrel-windows-x86_64 0.8.3 214.00 132.00 346.00 OK

Additional issues

gcc

Check Details

Version: 0.8.3
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp06Ej5J’ ‘~/tmp/scratch/Rtmp0J2OPt’ ‘~/tmp/scratch/Rtmp0upXRx’ ‘~/tmp/scratch/Rtmp1DRIUH’ ‘~/tmp/scratch/Rtmp1H5KOV’ ‘~/tmp/scratch/Rtmp2xDyqG’ ‘~/tmp/scratch/Rtmp3iMg6g’ ‘~/tmp/scratch/Rtmp48li0g’ ‘~/tmp/scratch/Rtmp4MmFAX’ ‘~/tmp/scratch/Rtmp4Pa28i’ ‘~/tmp/scratch/Rtmp4cJb6H’ ‘~/tmp/scratch/Rtmp4g23MI’ ‘~/tmp/scratch/Rtmp4j6HHi’ ‘~/tmp/scratch/Rtmp5asV6a’ ‘~/tmp/scratch/Rtmp6Eyznq’ ‘~/tmp/scratch/Rtmp6W7heN’ ‘~/tmp/scratch/Rtmp6aQOse’ ‘~/tmp/scratch/Rtmp6bjaRW’ ‘~/tmp/scratch/Rtmp6pqfZJ’ ‘~/tmp/scratch/Rtmp8ADnQj’ ‘~/tmp/scratch/Rtmp8tOTFA’ ‘~/tmp/scratch/Rtmp9GmfzQ’ ‘~/tmp/scratch/RtmpANRxpY’ ‘~/tmp/scratch/RtmpAZsSVA’ ‘~/tmp/scratch/RtmpAm4MyF’ ‘~/tmp/scratch/RtmpAvGIxU’ ‘~/tmp/scratch/RtmpBjgkU2’ ‘~/tmp/scratch/RtmpBmc0iG’ ‘~/tmp/scratch/RtmpCIYD5z’ ‘~/tmp/scratch/RtmpCtCdPg’ ‘~/tmp/scratch/RtmpDp1tyL’ ‘~/tmp/scratch/RtmpEo1J55’ ‘~/tmp/scratch/RtmpEwBqSh’ ‘~/tmp/scratch/RtmpFd6jOn’ ‘~/tmp/scratch/RtmpFdvha9’ ‘~/tmp/scratch/RtmpFuT2KE’ ‘~/tmp/scratch/RtmpG4KTbk’ ‘~/tmp/scratch/RtmpGAg7N8’ ‘~/tmp/scratch/RtmpGC81Gc’ ‘~/tmp/scratch/RtmpGUwpEP’ ‘~/tmp/scratch/RtmpGVbqjT’ ‘~/tmp/scratch/RtmpH6LuFI’ ‘~/tmp/scratch/RtmpHGnWDC’ ‘~/tmp/scratch/RtmpHdQ7Sv’ ‘~/tmp/scratch/RtmpI10rAw’ ‘~/tmp/scratch/RtmpI60ANJ’ ‘~/tmp/scratch/RtmpK6rrGR’ ‘~/tmp/scratch/RtmpKHiMkx’ ‘~/tmp/scratch/RtmpKotQ1E’ ‘~/tmp/scratch/RtmpKpptlf’ ‘~/tmp/scratch/RtmpL1ZXcD’ ‘~/tmp/scratch/RtmpM2kTx7’ ‘~/tmp/scratch/RtmpMASuKE’ ‘~/tmp/scratch/RtmpMe4Z1F’ ‘~/tmp/scratch/RtmpN8AO2o’ ‘~/tmp/scratch/RtmpNdM3yu’ ‘~/tmp/scratch/RtmpNwnrv2’ ‘~/tmp/scratch/RtmpOktzIK’ ‘~/tmp/scratch/RtmpPIZCqe’ ‘~/tmp/scratch/RtmpPQfWNw’ ‘~/tmp/scratch/RtmpPteNTo’ ‘~/tmp/scratch/RtmpQBNOE7’ ‘~/tmp/scratch/RtmpR4nlqy’ ‘~/tmp/scratch/RtmpRBxm3s’ ‘~/tmp/scratch/RtmpRnjMWx’ ‘~/tmp/scratch/RtmpRqmkww’ ‘~/tmp/scratch/RtmpS1EPE2’ ‘~/tmp/scratch/RtmpS1k19Z’ ‘~/tmp/scratch/RtmpSDkaJ8’ ‘~/tmp/scratch/RtmpSTB9Qo’ ‘~/tmp/scratch/RtmpSasSzk’ ‘~/tmp/scratch/RtmpTyaRmz’ ‘~/tmp/scratch/RtmpUZJcUz’ ‘~/tmp/scratch/RtmpUld6q5’ ‘~/tmp/scratch/RtmpXFYINm’ ‘~/tmp/scratch/RtmpXV2tqu’ ‘~/tmp/scratch/RtmpYQFAz9’ ‘~/tmp/scratch/Rtmpa5Hgu2’ ‘~/tmp/scratch/RtmpaKrw3f’ ‘~/tmp/scratch/RtmpaMYGQ3’ ‘~/tmp/scratch/RtmpagMPJL’ ‘~/tmp/scratch/RtmpasKu0w’ ‘~/tmp/scratch/RtmpbmhB7B’ ‘~/tmp/scratch/RtmpbtQCNa’ ‘~/tmp/scratch/RtmpcGiUki’ ‘~/tmp/scratch/Rtmpd7ZM14’ ‘~/tmp/scratch/RtmpdhBRdm’ ‘~/tmp/scratch/RtmpendNhX’ ‘~/tmp/scratch/RtmpexoNgJ’ ‘~/tmp/scratch/Rtmpf7z1ZK’ ‘~/tmp/scratch/Rtmpfk4HqE’ ‘~/tmp/scratch/RtmpgJoOYU’ ‘~/tmp/scratch/RtmpgMNDv8’ ‘~/tmp/scratch/Rtmpgi272w’ ‘~/tmp/scratch/RtmphiaHjU’ ‘~/tmp/scratch/RtmpiDqPBZ’ ‘~/tmp/scratch/RtmpiY6eFo’ ‘~/tmp/scratch/RtmpikaLaX’ ‘~/tmp/scratch/RtmpirnSpS’ ‘~/tmp/scratch/RtmpisTsYy’ ‘~/tmp/scratch/RtmpjX9Vtn’ ‘~/tmp/scratch/RtmpkGDXma’ ‘~/tmp/scratch/RtmpkLoXpp’ ‘~/tmp/scratch/Rtmpl3MUDQ’ ‘~/tmp/scratch/Rtmpl4BhMJ’ ‘~/tmp/scratch/RtmplH2Gy4’ ‘~/tmp/scratch/RtmpmX22hW’ ‘~/tmp/scratch/RtmpnZvWcD’ ‘~/tmp/scratch/RtmpnaH7tW’ ‘~/tmp/scratch/RtmpndriXI’ ‘~/tmp/scratch/RtmpnmEb3d’ ‘~/tmp/scratch/Rtmpnzzdx1’ ‘~/tmp/scratch/RtmpoYSTbf’ ‘~/tmp/scratch/RtmpqFJv8j’ ‘~/tmp/scratch/RtmprAea4u’ ‘~/tmp/scratch/RtmprGgk5I’ ‘~/tmp/scratch/RtmprvOBtK’ ‘~/tmp/scratch/Rtmps1bgtw’ ‘~/tmp/scratch/Rtmps6kMXc’ ‘~/tmp/scratch/RtmpsRz6rC’ ‘~/tmp/scratch/RtmptFtotj’ ‘~/tmp/scratch/RtmptM6LD8’ ‘~/tmp/scratch/RtmptmUj86’ ‘~/tmp/scratch/Rtmptmzg6f’ ‘~/tmp/scratch/Rtmpu32T11’ ‘~/tmp/scratch/RtmpuRpyRr’ ‘~/tmp/scratch/Rtmpv6BiLc’ ‘~/tmp/scratch/Rtmpw8C8WP’ ‘~/tmp/scratch/RtmpwOpchc’ ‘~/tmp/scratch/RtmpyHSZ7k’ ‘~/tmp/scratch/RtmpyXYh3S’ ‘~/tmp/scratch/RtmpyvcEgf’ ‘~/tmp/scratch/RtmpyydCWM’ ‘~/tmp/scratch/Rtmpzg0ug3’ ‘~/tmp/scratch/xvfb-run.01RgM4’ ‘~/tmp/scratch/xvfb-run.0FfPDP’ ‘~/tmp/scratch/xvfb-run.0nY7oD’ ‘~/tmp/scratch/xvfb-run.2Tyq8H’ ‘~/tmp/scratch/xvfb-run.4pBYmI’ ‘~/tmp/scratch/xvfb-run.5luBOX’ ‘~/tmp/scratch/xvfb-run.707gSZ’ ‘~/tmp/scratch/xvfb-run.7Q1bte’ ‘~/tmp/scratch/xvfb-run.BdSLqQ’ ‘~/tmp/scratch/xvfb-run.DArPK8’ ‘~/tmp/scratch/xvfb-run.ELlXnn’ ‘~/tmp/scratch/xvfb-run.FH2NxK’ ‘~/tmp/scratch/xvfb-run.G4cy6v’ ‘~/tmp/scratch/xvfb-run.GE4o1o’ ‘~/tmp/scratch/xvfb-run.GMD3Uq’ ‘~/tmp/scratch/xvfb-run.GeTo02’ ‘~/tmp/scratch/xvfb-run.H3AHRP’ ‘~/tmp/scratch/xvfb-run.HMz8b1’ ‘~/tmp/scratch/xvfb-run.I1O62d’ ‘~/tmp/scratch/xvfb-run.I5L8wz’ ‘~/tmp/scratch/xvfb-run.IHArby’ ‘~/tmp/scratch/xvfb-run.IgUYoy’ ‘~/tmp/scratch/xvfb-run.JLwdLT’ ‘~/tmp/scratch/xvfb-run.KSdvj0’ ‘~/tmp/scratch/xvfb-run.L8C8SQ’ ‘~/tmp/scratch/xvfb-run.NQMIAX’ ‘~/tmp/scratch/xvfb-run.OoBuo4’ ‘~/tmp/scratch/xvfb-run.Pz2Zeo’ ‘~/tmp/scratch/xvfb-run.Q93I1B’ ‘~/tmp/scratch/xvfb-run.RsOmVS’ ‘~/tmp/scratch/xvfb-run.SMChks’ ‘~/tmp/scratch/xvfb-run.SSfnn2’ ‘~/tmp/scratch/xvfb-run.T3PFSG’ ‘~/tmp/scratch/xvfb-run.VLNr1Q’ ‘~/tmp/scratch/xvfb-run.Vi4ScI’ ‘~/tmp/scratch/xvfb-run.ZIdxyR’ ‘~/tmp/scratch/xvfb-run.ZukmuT’ ‘~/tmp/scratch/xvfb-run.dJl1HW’ ‘~/tmp/scratch/xvfb-run.elGzQY’ ‘~/tmp/scratch/xvfb-run.elQy0w’ ‘~/tmp/scratch/xvfb-run.hiPFZJ’ ‘~/tmp/scratch/xvfb-run.iiKXBq’ ‘~/tmp/scratch/xvfb-run.ijyPSh’ ‘~/tmp/scratch/xvfb-run.jfuyrV’ ‘~/tmp/scratch/xvfb-run.kZMboB’ ‘~/tmp/scratch/xvfb-run.keRgDm’ ‘~/tmp/scratch/xvfb-run.lL6mrG’ ‘~/tmp/scratch/xvfb-run.lypKzZ’ ‘~/tmp/scratch/xvfb-run.mYO8mg’ ‘~/tmp/scratch/xvfb-run.nCJHBn’ ‘~/tmp/scratch/xvfb-run.nF0IRu’ ‘~/tmp/scratch/xvfb-run.pufU3g’ ‘~/tmp/scratch/xvfb-run.t3MuRb’ ‘~/tmp/scratch/xvfb-run.uGwtoO’ ‘~/tmp/scratch/xvfb-run.ugyfaC’ ‘~/tmp/scratch/xvfb-run.wBTywW’ ‘~/tmp/scratch/xvfb-run.yJzNCR’ ‘~/tmp/scratch/xvfb-run.ySU4uj’ ‘~/tmp/scratch/xvfb-run.zp65Yl’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.8.3
Check: whether package can be installed
Result: WARN Found the following significant warnings: faidx.c:1042:25: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] sam.c:5294:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] cram/cram_decode.c:1229:35: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] cram/cram_io.c:2530:22: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] cram/cram_io.c:5353:29: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] hts.c:939:33: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] hts.c:1465:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] hts.c:4829:19: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] See ‘/data/localhost/ripley/R/packages/tests-devel/vcfppR.Rcheck/00install.out’ for details. * used C++ compiler: ‘g++ (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2)’ Flavor: r-devel-linux-x86_64-fedora-gcc