Last updated on 2026-03-10 16:53:07 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.13.3 | 24.08 | 194.21 | 218.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.13.3 | 14.72 | 128.67 | 143.39 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.13.3 | 39.00 | 290.81 | 329.81 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 1.13.3 | 36.00 | 264.51 | 300.51 | OK | |
| r-devel-macos-arm64 | 1.13.3 | 5.00 | 49.00 | 54.00 | OK | |
| r-devel-windows-x86_64 | 1.13.3 | 24.00 | 226.00 | 250.00 | OK | |
| r-patched-linux-x86_64 | 1.13.3 | 22.33 | 185.98 | 208.31 | OK | |
| r-release-linux-x86_64 | 1.13.3 | 19.22 | 183.51 | 202.73 | OK | |
| r-release-macos-arm64 | 1.13.3 | OK | ||||
| r-release-macos-x86_64 | 1.13.3 | 15.00 | 202.00 | 217.00 | OK | |
| r-release-windows-x86_64 | 1.13.3 | 22.00 | 248.00 | 270.00 | OK | |
| r-oldrel-macos-arm64 | 1.13.3 | NOTE | ||||
| r-oldrel-macos-x86_64 | 1.13.3 | 15.00 | 213.00 | 228.00 | NOTE | |
| r-oldrel-windows-x86_64 | 1.13.3 | 32.00 | 266.00 | 298.00 | NOTE |
Version: 1.13.3
Check: examples
Result: ERROR
Running examples in ‘wrProteo-Ex.R’ failed
The error most likely occurred in:
> ### Name: extractTestingResults
> ### Title: Extract Results From Moderated t-tests
> ### Aliases: extractTestingResults
>
> ### ** Examples
>
> grp <- factor(rep(LETTERS[c(3,1,4)],c(2,3,3)))
> set.seed(2017); t8 <- matrix(round(rnorm(208*8,10,0.4),2), ncol=8,
+ dimnames=list(paste(letters[],rep(1:8,each=26),sep=""), paste(grp,c(1:2,1:3,1:3),sep="")))
> t8[3:6,1:2] <- t8[3:6,1:2] +3 # augment lines 3:6 (c-f)
> t8[5:8,c(1:2,6:8)] <- t8[5:8,c(1:2,6:8)] -1.5 # lower lines
> t8[6:7,3:5] <- t8[6:7,3:5] +2.2 # augment lines
> ## expect to find C/A in c,d,g, (h)
> ## expect to find C/D in c,d,e,f
> ## expect to find A/D in f,g,(h)
> library(wrMisc) # for testing we'll use this package
> test8 <- moderTestXgrp(t8, grp)
> extractTestingResults(test8)
extractTestingResults : Cannot find list-element 'annot' in test8
Error in wrMisc::sampNoDeMArrayLM(stat, compNo, lstP = useFdrTy) :
unused argument (lstP = useFdrTy)
Calls: extractTestingResults
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.13.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘wrProteoVignette1.Rmd’ using rmarkdown
Quitting from wrProteoVignette1.Rmd:798-800 [results1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `wrMisc::sampNoDeMArrayLM()`:
! unused argument (lstP = useFdrTy)
---
Backtrace:
▆
1. └─wrProteo::extractTestingResults(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'wrProteoVignette1.Rmd' failed with diagnostics:
unused argument (lstP = useFdrTy)
--- failed re-building ‘wrProteoVignette1.Rmd’
--- re-building ‘wrProteoVignetteUPS1.Rmd’ using rmarkdown
Quitting from wrProteoVignetteUPS1.Rmd:576-580 [check2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `wrMisc::sampNoDeMArrayLM()`:
! unused argument (lstP = useFdrTy)
---
Backtrace:
▆
1. └─wrProteo::extractTestingResults(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'wrProteoVignetteUPS1.Rmd' failed with diagnostics:
unused argument (lstP = useFdrTy)
--- failed re-building ‘wrProteoVignetteUPS1.Rmd’
SUMMARY: processing the following files failed:
‘wrProteoVignette1.Rmd’ ‘wrProteoVignetteUPS1.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.13.3
Check: installed package size
Result: NOTE
installed size is 6.5Mb
sub-directories of 1Mb or more:
doc 2.8Mb
extdata 2.5Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64