ggDNAvis: 'ggplot2'-Based Tools for Visualising DNA Sequences and
Modifications
Uses 'ggplot2' to visualise either (a) a single DNA/RNA sequence split across multiple lines, (b) multiple DNA/RNA sequences, each occupying a whole line, or (c) base modifications such as DNA methylation called by modified bases models in Dorado or Guppy. Functions starting with visualise_<>() are the main plotting functions, and functions starting with extract_and_sort_<>() are key helper functions for reading files and reformatting data. Source code is available at <https://github.com/ejade42/ggDNAvis>, a full non-expert user guide is available at <https://ejade42.github.io/ggDNAvis/>, and an interactive web-app version of the software is available at <https://ejade42.github.io/ggDNAvis/articles/interactive_app.html>.
| Version: |
1.0.0 |
| Depends: |
R (≥ 3.5) |
| Imports: |
cli, dplyr, ggnewscale, ggplot2 (≥ 4.0.0), grid, magick, png, ragg, rlang, stats, stringr, tidyr, utils |
| Suggests: |
bslib, colourpicker, jsonlite, knitr, markdown, rmarkdown, shiny, shinyjs, testthat (≥ 3.0.0) |
| Published: |
2026-03-06 |
| DOI: |
10.32614/CRAN.package.ggDNAvis |
| Author: |
Evelyn Jade  [aut,
cre, cph] |
| Maintainer: |
Evelyn Jade <evelynjade42 at gmail.com> |
| BugReports: |
https://github.com/ejade42/ggDNAvis/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://ejade42.github.io/ggDNAvis/,
https://github.com/ejade42/ggDNAvis,
https://doi.org/10.64898/2026.03.02.708895 |
| NeedsCompilation: |
no |
| Language: |
en-GB |
| Citation: |
ggDNAvis citation info |
| Materials: |
NEWS |
| CRAN checks: |
ggDNAvis results |
Documentation:
Downloads:
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