ocrRBBR: Explain Gene Expression with Boolean Rules of Chromatin States

Infers Boolean rules among cis-regulatory regions using paired chromatin accessibility and gene expression data at bulk and single-cell levels. Links regulatory regions to target genes, providing insights into gene regulation mechanisms.

Version:	0.1.0
Depends:	R (≥ 4.4)
Imports:	doParallel, dplyr, foreach, GenomeInfoDb, GenomicRanges, glmnet, Matrix, parallel, rtracklayer, S4Vectors, stats, utils
Published:	2026-02-09
DOI:	10.32614/CRAN.package.ocrRBBR (may not be active yet)
Author:	Seyed Amir Malekpour [aut, cre]
Maintainer:	Seyed Amir Malekpour <a.malekpour at ipm.ir>
License:	GPL-3
URL:	https://github.com/CompBioIPM/ocrRBBR
NeedsCompilation:	no
Materials:	NEWS
CRAN checks:	ocrRBBR results

Documentation:

Reference manual:

ocrRBBR.html , ocrRBBR.pdf

Downloads:

Package source:	ocrRBBR_0.1.0.tar.gz
Windows binaries:	r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries:	r-release (arm64): ocrRBBR_0.1.0.tgz, r-oldrel (arm64): ocrRBBR_0.1.0.tgz, r-release (x86_64): ocrRBBR_0.1.0.tgz, r-oldrel (x86_64): ocrRBBR_0.1.0.tgz

Linking:

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